PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023542752.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 233aa    MW: 26244 Da    PI: 9.3853
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023542752.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.31e-1181128555
                     HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +   E+ RR+r+N++f eL ++l +    +s+K +K+ iL  Av+ I +L+
  XP_023542752.1  81 KAHKEKVRRNRLNDRFLELNSILNHG---TSPKIDKSVILGDAVRMILQLR 128
                     5678*********************9...9*******************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MKSPEITDWV FDYALIEDFP VPGGDLPSLD LPVFTLSSRD FTASFSVLRE DFDEAHGKLN  60
DIKESGSRKR MSSGSGASLS KAHKEKVRRN RLNDRFLELN SILNHGTSPK IDKSVILGDA  120
VRMILQLRDE AQKLKESNEN FLEKINEMKA EKNELRDEKQ RLKEAKDNLK QKMKTFITQP  180
SFLPHPSAFS APNHVVGAKF VPVIGYPGVS MWKLMPQGAI DTSQDHVLRP PVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.17e-62bHLH family protein