PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023542506.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 353aa    MW: 38832.9 Da    PI: 6.2606
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023542506.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH46.27.9e-1599150155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +r +h  +Er+RR+++N+ ++ Lr+l+P     + kK + a+i   +veYIk+Lq
  XP_023542506.1  99 QRISHITVERNRRKQMNEHLSILRTLMPCF---YVKKGDQASIIGGVVEYIKELQ 150
                     699**************************9...9********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    
MVASLAQFFQ PNQEFVDNTT PHLQGDDLFS IFESLESVAE FTMIADDIEP TKDGEETTSL  60
VFSETELEAS PKTKRLKTTT TTTMAKASPL EEANPDGTQR ISHITVERNR RKQMNEHLSI  120
LRTLMPCFYV KKGDQASIIG GVVEYIKELQ QVLQSLEAKR QRKVYSEGLS PRVVSSPRPN  180
LQMSPRKPPL SPRLNLPISP RTPQPTSPYT KPPRLQQPPT ATASSGCTTN MANNNNNNNS  240
LEPSPCNSSS TTYSSIDNAN NGNNDLVANS KSGIAEVEVK FTGPNVVLKT VSPPIPGQAV  300
KIISALEHLS LEILHVKITT LDQTMINSFT IKIGIECQLS AEELAHQIQQ TFC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53210.12e-55bHLH family protein