PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023542490.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TALE

Protein Properties

Length: 322aa MW: 36424.2 Da PI: 4.7929

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023542490.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.9	4e-09	266	300	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yp+++++ LA+++gL+++q+ +WF N+R ++ XP_023542490.1 266 KWPYPTEADKVALAERTGLDQKQINNWFINQRKRH 300 679*****************************885 PP
2	ELK	26.8	1.2e-09	220	241	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 +LK+ Llr ++++++sLk EFs XP_023542490.1 220 DLKDKLLRRFGSHISSLKLEFS 241 69*******************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 322 aa Download sequence
MEEMYGLQST AEYSDKALMS PENLILPPDY QSLLVSSGEF RDRIPVFGSN ELLSAAASVI 60 SEAEAASITM EIQCEEDMVN VIKAKISSHP TYPRLLDAYI DCQKVGAPPA ISHLLEGIRQ 120 ESDICNRHAV ATCLGVDPEL DEFMETYCDM LVKYKSDLKR PFDEATTFLN KIELQLSNLC 180 NGAFSRSLSD EGAASSDEEL SGGEMEAVEA ETQTKGEKRD LKDKLLRRFG SHISSLKLEF 240 SKKKKKGKLP KEARQTLLEW WNVHYKWPYP TEADKVALAE RTGLDQKQIN NWFINQRKRH 300 WKPSENMQLE GMDELSSETV RS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	1e-126	TALE family protein