PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023542450.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | NAC | ||||||||
Protein Properties | Length: 237aa MW: 27024.4 Da PI: 5.2241 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 144.3 | 6.9e-45 | 15 | 145 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 ppGfrF Pt+eel+++yL+++++g+ le ++vi+ ++iy++ePwdLpk +k+++++w+fF+ r++++a+g r++r+t++gyWkatg+ v XP_023542450.1 15 PPGFRFYPTEEELISFYLRHQLNGQLLEKHRVIPLLNIYDSEPWDLPKfageLCKGDSEQWFFFVARQEREARGGRPSRTTATGYWKATGSPVYV 109 9****************************99****************656764556778************************************ PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +s+ ++ +glkkt+vfykgrap+g+kt+W m+eyr+ XP_023542450.1 110 YSAANKIIGLKKTMVFYKGRAPTGTKTKWKMNEYRA 145 **********************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MSMAIEENDS NVEYPPGFRF YPTEEELISF YLRHQLNGQL LEKHRVIPLL NIYDSEPWDL 60 PKFAGELCKG DSEQWFFFVA RQEREARGGR PSRTTATGYW KATGSPVYVY SAANKIIGLK 120 KTMVFYKGRA PTGTKTKWKM NEYRAIDDST KLRYEFSLCR VYVISGCFRA FDRRPMEVIG 180 DGRNNADQKQ KAEAITAAIS CSAPATGFCG VSGGSSGMVE DEEIEEANWE WDQIDWP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22380.1 | 1e-80 | NAC family protein |