PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023542438.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 277aa    MW: 30993 Da    PI: 4.4056
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023542438.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.32.4e-07159201855
                     HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     + r RR+ri  + +eL el+P        K++ ae+L  A +Y+k Lq
  XP_023542438.1 159 AARERRRRITAKTQELGELIPGG-----VKMNTAEMLNSAFKYVKFLQ 201
                     66999999*************96.....6******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MAALTFFSNF YSDPSSINPQ FPCFSPEMSP DLFFLPPPHL DYVPAMPDDS VFIPTVAPFF  60
DNASPFLFSD VYPYFSAEFF PFDEFEFHYS KRQRIVLEQS FCYGGVGGNV GGGGGGCGYF  120
PSSLLDGRMD NAEMMNNGNC SKTKQLASPS NALSVQTIAA RERRRRITAK TQELGELIPG  180
GVKMNTAEML NSAFKYVKFL QAQVAILQLK QETEHELEEQ ETEDLQILES AMIQEKLYSE  240
EQCLVPKGFV QNLANFPEIQ SHPFISNSIN QILKTSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34820.13e-21bHLH family protein