PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023542312.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | Trihelix | ||||||||
Protein Properties | Length: 398aa MW: 45091.7 Da PI: 6.3968 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 89.9 | 2.9e-28 | 126 | 211 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+l+L+e+r++++++++++++k+plW++vs+ m +e g++rs k+Ckek++nl k+ykk+keg+ +r+ + +++++f+qlea XP_023542312.1 126 RWPRQETLTLLEIRSRLDSKFKESNQKGPLWDQVSRMMeEEYGYKRSGKKCKEKFDNLYKYYKKTKEGKTGRH--DGKHYRFFRQLEA 211 8*************************************7788****************************985..5557*******85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 398 aa Download sequence |
MSDKYPYPDL RQLTADKPIF PATPQTLDSF FPHQTHLTRG FSPAPPPPPP PPLPKFPPLQ 60 LLLPDPTVLP DGLFQFGCTN TSAATGGATP SAAVSAPFYR RNKMMDGEWC PYGNDVVGGS 120 NGANSRWPRQ ETLTLLEIRS RLDSKFKESN QKGPLWDQVS RMMEEEYGYK RSGKKCKEKF 180 DNLYKYYKKT KEGKTGRHDG KHYRFFRQLE AIYGGCNDQL SSPTVVESNI YRTSAAEAGE 240 AGINNNTGDE KALVGGTSLS FSISSDFETS SSGNYRDDDL SAIAFMMNQR RVETAREDDV 300 SKGDGGRGGR WREEVEKMLD CKLSRLMEVQ ENWMEKIMAS VEDGEKERIL KEEEWRKKEV 360 AKFDHEMNEF CARERAWIEA REAALMEIMK RFGGKGYD |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 170 | 178 | KRSGKKCKE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03680.1 | 3e-50 | Trihelix family protein |