PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023542199.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | bHLH | ||||||||
Protein Properties | Length: 187aa MW: 21020.2 Da PI: 8.7044 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 17.2 | 9.1e-06 | 17 | 66 | 6 | 54 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksL 54 + +E++RR +++s ++L l+P++ sk ls + ++ YI++L XP_023542199.1 17 KTVEKNRRIHMKSLCSKLFNLVPSSHYKISKDlLSQQTQISYVIAYINEL 66 679*********************54444444599999999999999887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 187 aa Download sequence |
MAKPGIDGGA SFKLDRKTVE KNRRIHMKSL CSKLFNLVPS SHYKISKDLL SQQTQISYVI 60 AYINELKERV ESLEKKKEAL QLQIHSQLPT SSDSTFPIVE VRELCSGIVH VTLISSVDRN 120 VMLNEIIGVV EEEGGEVVSA SFSTLGDKVF HSLHIEAKIP RVGIETSRVE KRLKHLIIEA 180 REDGRDK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G10586.1 | 5e-14 | bHLH family protein |