PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023542028.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | ARR-B | ||||||||
Protein Properties | Length: 494aa MW: 55330.3 Da PI: 9.2619 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 80.2 | 2.5e-25 | 196 | 249 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kp++ Wt+ LH+rF++a++ + G +kA+Pk+ile+m+v+gLt+e+v+SHLQkYR+ XP_023542028.1 196 KPKVIWTNSLHNRFLQAIKLI-GLDKAVPKKILEFMNVPGLTRENVASHLQKYRI 249 799****************99.********************************6 PP | |||||||
2 | Myb_DNA-binding | 32.7 | 1.7e-10 | 201 | 248 | 4 | 48 |
S-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT ++ ++++a+k+ G + +k+I + m+ g+t++++ s++qky+ XP_023542028.1 201 WTNSLHNRFLQAIKLIGLDkaVPKKILEFMNvPGLTRENVASHLQKYR 248 ***********************************************7 PP | |||||||
3 | Response_reg | 65.9 | 1.9e-22 | 15 | 121 | 1 | 107 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+ + + ++ +l+ +y +v + +++ eal++l++++ +Dl+l+D+ mp+++Gl+l k+ +e klp+i+++a ++++ +l+ l+ G XP_023542028.1 15 VLLVDDDATSLAVVSAMLRVCKY-QVVTLKNPMEALDTLRARKgfFDLLLTDLHMPQLSGLQLQKQVMQEF-KLPVIMMSADEKPSVILKSLEEG 107 89*********************.9999***********999999**********************9988.9********************** PP ESEEEESS--HHHH CS Response_reg 94 akdflsKpfdpeel 107 + + +Kp++ +++ XP_023542028.1 108 VAFYMVKPISLNDV 121 *********99876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 494 aa Download sequence |
MGEVCEGVKF VDIHVLLVDD DATSLAVVSA MLRVCKYQVV TLKNPMEALD TLRARKGFFD 60 LLLTDLHMPQ LSGLQLQKQV MQEFKLPVIM MSADEKPSVI LKSLEEGVAF YMVKPISLND 120 VKHVWQYAIT PKKVSPDQTT TIIPHELSIQ IQKSSFKNSS SSPSCSRREI KSKSSEPKNK 180 KAKESKVAKN SIAMRKPKVI WTNSLHNRFL QAIKLIGLDK AVPKKILEFM NVPGLTRENV 240 ASHLQKYRIF LKRVAEKGAR SMKIYCDNVL QRSNSAAPHV QYPLYRSKLQ AQHPNFPQNQ 300 QLMVPLNNQS PTLGSFKQPT PQNPNLEGAS MENPLAHFWN QKYSTLLTIN KLNFPNFNGD 360 QNFVLVRNEN PKCSSDGTGR TTGEDRMICS SRNGVCNVQA SDDLNNGGCA SIGSYFGQFE 420 GTNQLLPVVS NINVEKNVLV SSEEEVGNDN IWKAANESNA FGDIGEDQSY FDVLSDIFMG 480 HNDTQTSLQV RFRT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G07210.1 | 7e-48 | ARR-B family protein |