PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023542014.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 450aa MW: 49949.1 Da PI: 6.519

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023542014.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166.8	7.3e-52	32	159	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 l+pGfrFhPtdeelv +yLk+kv gk++++ ++i+evdiyk+ePwdL +++k++++e+yfFs dkky +g r nrat++gyWkatg+d++v XP_023542014.1 32 LAPGFRFHPTDEELVIYYLKRKVCGKSFRF-NAISEVDIYKSEPWDLAgkSRLKSRDQEYYFFSVLDKKYGNGARMNRATSQGYWKATGNDRQVR 125 579***********************99.89**********85348889999*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++++vglkktLvf++grap+g++t+Wvmheyrl XP_023542014.1 126 H-DTRTVGLKKTLVFHSGRAPDGKRTNWVMHEYRL 159 .999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 450 aa Download sequence
MGSETLTLSP PLALTKPVAA AAAAAAAAPT ALAPGFRFHP TDEELVIYYL KRKVCGKSFR 60 FNAISEVDIY KSEPWDLAGK SRLKSRDQEY YFFSVLDKKY GNGARMNRAT SQGYWKATGN 120 DRQVRHDTRT VGLKKTLVFH SGRAPDGKRT NWVMHEYRLV DEELEKAGAG TGSSKDAYVL 180 CRVFHKSNIG PPNGHRYAPF IEEEWDDGGS VLIPGEEIAD GVVASHDTQS EKNSNSVCAA 240 EDRNNHVCGD GKDGMQERTQ FINKDLVMSN DPPRNSHSFL FMCKSEELED YTPPSIIANP 300 KPFSLMKYKR RRQSDLPSEL SKASENSSMS NEELSLSEIA TASQTDVTTS SATTPTTKNF 360 LSTLVEYSLL ESTEPKDSPA PPPALETSDL SSSVHPSILK FIQDLQHEIH KTSMERETLK 420 FELLSARAMI SILQSRIVVL NKEINDLKSN

Sequence ? help Back to Top

Protein Sequence Length: 450 aa Download sequence

MGSETLTLSP PLALTKPVAA AAAAAAAAPT ALAPGFRFHP TDEELVIYYL KRKVCGKSFR  60
FNAISEVDIY KSEPWDLAGK SRLKSRDQEY YFFSVLDKKY GNGARMNRAT SQGYWKATGN  120
DRQVRHDTRT VGLKKTLVFH SGRAPDGKRT NWVMHEYRLV DEELEKAGAG TGSSKDAYVL  180
CRVFHKSNIG PPNGHRYAPF IEEEWDDGGS VLIPGEEIAD GVVASHDTQS EKNSNSVCAA  240
EDRNNHVCGD GKDGMQERTQ FINKDLVMSN DPPRNSHSFL FMCKSEELED YTPPSIIANP  300
KPFSLMKYKR RRQSDLPSEL SKASENSSMS NEELSLSEIA TASQTDVTTS SATTPTTKNF  360
LSTLVEYSLL ESTEPKDSPA PPPALETSDL SSSVHPSILK FIQDLQHEIH KTSMERETLK  420
FELLSARAMI SILQSRIVVL NKEINDLKSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10480.2	1e-116	NAC family protein