PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023541995.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NAC
Protein Properties Length: 295aa    MW: 32885.9 Da    PI: 7.7285
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023541995.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM107.22.1e-33411811128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk.......lelee....vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.... 79 
                     lp+G++F+Ptd+e++ e+L++k++ ++       +   +    +++   +i++++P++Lp  v+++ +  +fF++ +k+y+tg+rk+r+++    
  XP_023541995.1  41 LPAGVKFDPTDQEIL-EHLQAKAAVSDahklhplI---DefipTLEGEnGICYTHPQKLP--VSKDGQIRHFFHRPSKAYTTGTRKRRKVHtdee 129
                     799***********9.9999998888755554332...132222433336**********..55566778******************7443455 PP

             NAM  80 ..sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                       + +W++tgk+++v++ +g ++g kk+Lv+y   gr++k+ekt+Wvmh+y+l
  XP_023541995.1 130 gnETRWHKTGKTRPVFV-GGVVKGFKKILVLYtnYGRQRKPEKTNWVMHQYHL 181
                     55788************.**************66589**************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MTWCSGSDDD ESSTAPALRC PSCGLHIELQ DQAGIHDLPG LPAGVKFDPT DQEILEHLQA  60
KAAVSDAHKL HPLIDEFIPT LEGENGICYT HPQKLPVSKD GQIRHFFHRP SKAYTTGTRK  120
RRKVHTDEEG NETRWHKTGK TRPVFVGGVV KGFKKILVLY TNYGRQRKPE KTNWVMHQYH  180
LGTNEEEKDG ELVVSKVFYQ TQPRQCNSTA TAAATAAAAL LQSEIKYKNA AAAANHHSDS  240
TTHVDYYNAS NFISFDHNSD NPPQLLPNLV LSGDASSFLR FPPADTTKRK LDMKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28470.11e-106NAC family protein