PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023541994.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 296aa MW: 32942.9 Da PI: 7.7285 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 107.5 | 1.6e-33 | 41 | 182 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.......lelee....vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.... 79 lp+G++F+Ptd+e++ e+L++k++ ++ + + +++ +i++++P++Lp v+++ + +fF++ +k+y+tg+rk+r+++ XP_023541994.1 41 LPAGVKFDPTDQEIL-EHLQAKAAVSDahklhplI---DefipTLEGEnGICYTHPQKLP-GVSKDGQIRHFFHRPSKAYTTGTRKRRKVHtdee 130 799***********9.9999998888755554332...132222433336**********.555666777******************7443455 PP NAM 80 ..sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v++ +g ++g kk+Lv+y gr++k+ekt+Wvmh+y+l XP_023541994.1 131 gnETRWHKTGKTRPVFV-GGVVKGFKKILVLYtnYGRQRKPEKTNWVMHQYHL 182 55788************.**************66589**************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 296 aa Download sequence |
MTWCSGSDDD ESSTAPALRC PSCGLHIELQ DQAGIHDLPG LPAGVKFDPT DQEILEHLQA 60 KAAVSDAHKL HPLIDEFIPT LEGENGICYT HPQKLPGVSK DGQIRHFFHR PSKAYTTGTR 120 KRRKVHTDEE GNETRWHKTG KTRPVFVGGV VKGFKKILVL YTNYGRQRKP EKTNWVMHQY 180 HLGTNEEEKD GELVVSKVFY QTQPRQCNST ATAAATAAAA LLQSEIKYKN AAAAANHHSD 240 STTHVDYYNA SNFISFDHNS DNPPQLLPNL VLSGDASSFL RFPPADTTKR KLDMKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G28470.1 | 1e-108 | NAC family protein |