PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023541981.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 291aa MW: 32836.6 Da PI: 5.0231 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 59.3 | 6.5e-19 | 100 | 153 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t++q++ Le+ Fe ++++ e++ +LAk l+L+ rqV +WFqNrRa++k XP_023541981.1 100 KKRRLTSDQVRFLEKSFEIDNKLELERKVQLAKDLELKPRQVAIWFQNRRARWK 153 56789************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 119.7 | 1.5e-38 | 99 | 189 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 ekkrrl+++qv++LE+sFe ++kLe erKv+la++L+l+prqva+WFqnrRAR+ktkqlEk+yeaL+++y +lk e e+L ke+++L++++ XP_023541981.1 99 EKKRRLTSDQVRFLEKSFEIDNKLELERKVQLAKDLELKPRQVAIWFQNRRARWKTKQLEKNYEALQSSYGSLKVEYEKLLKEKDSLKAKI 189 69**************************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 291 aa Download sequence |
MAVRRVYGGG DDGGSISGVS SNHTVFLQNR KGSSVSEPLN ALFVSGSSSS TSPSMLGSKS 60 TISFKDIHGR NGSTRPFFYS FDTEDNGNED LDDYFHHPEK KRRLTSDQVR FLEKSFEIDN 120 KLELERKVQL AKDLELKPRQ VAIWFQNRRA RWKTKQLEKN YEALQSSYGS LKVEYEKLLK 180 EKDSLKAKIL VLTDKLLLKA KEKGSSVVSE VDKSSDIFNT DSPLVEPRDS SYIFDPDQSD 240 LSQDEDDNMG KNLLPTYVFP KLEDVDCSDP PASACSFVFP IDEDSALWSW S |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 148 | 156 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01470.1 | 5e-34 | HD-ZIP family protein |