PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023541499.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 561aa MW: 62644.4 Da PI: 4.4731

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023541499.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	171.8	2.1e-53	9	136	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 l+pGfrFhPtdeelv++yLk+kv+gk++++ ++i++vdiyk+ePwdLp k k+k+++ ewyfFs dkky +++r+nrat++gyWk+tgkd++v XP_023541499.1 9 LAPGFRFHPTDEELVSYYLKRKVSGKPFRF-DAISDVDIYKSEPWDLPgKsKLKSRDLEWYFFSALDKKYGNSSRTNRATEKGYWKTTGKDRPVR 102 579************************9.99***********6347777888*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + + ++vg+kktLv++ grap+g +t+Wvmhey+l XP_023541499.1 103 H-NARTVGMKKTLVYHIGRAPRGARTNWVMHEYKL 136 .999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 561 aa Download sequence
MGRDSATSLA PGFRFHPTDE ELVSYYLKRK VSGKPFRFDA ISDVDIYKSE PWDLPGKSKL 60 KSRDLEWYFF SALDKKYGNS SRTNRATEKG YWKTTGKDRP VRHNARTVGM KKTLVYHIGR 120 APRGARTNWV MHEYKLTDEE LGKFATVQDA FVLCRIFQKS GTGPKNGEQY GAPFVEEEWE 180 DNDELTLVPG DEQVAEEILA GGGIFVEGND FSQNVDEDLL SEIAPPPPFD FYYGESSNSM 240 EQSDNFIEDD RKPAVGICET SELPDGQKFF VLPDECRLRD RLVKHEYLAE SSNAAADEID 300 ASDVDGHYVL DKPFFSTSDN PSFSDELLLE SNELSNPTDS DPAAFDVLEE YLTFFDADGD 360 NVDLSFDPSE ILESESSVPD QAVLPEVVGG ATEQASPSKH TSDLRYDNEA SSSSSMQRSE 420 DPKPESDLKY PFLKHTSHML GSIPAPFASQ FTSKDAALHI NSAPQASSSV RVTAGMIVIR 480 NTTLNGDEMN SLYGKNSVLN LIYLYGIVEG DIYSSQLSPT SGAHHSKSGS LMSRYFVYFF 540 ILFWLLILSV SFKVARCIHS R

Sequence ? help Back to Top

Protein Sequence Length: 561 aa Download sequence

MGRDSATSLA PGFRFHPTDE ELVSYYLKRK VSGKPFRFDA ISDVDIYKSE PWDLPGKSKL  60
KSRDLEWYFF SALDKKYGNS SRTNRATEKG YWKTTGKDRP VRHNARTVGM KKTLVYHIGR  120
APRGARTNWV MHEYKLTDEE LGKFATVQDA FVLCRIFQKS GTGPKNGEQY GAPFVEEEWE  180
DNDELTLVPG DEQVAEEILA GGGIFVEGND FSQNVDEDLL SEIAPPPPFD FYYGESSNSM  240
EQSDNFIEDD RKPAVGICET SELPDGQKFF VLPDECRLRD RLVKHEYLAE SSNAAADEID  300
ASDVDGHYVL DKPFFSTSDN PSFSDELLLE SNELSNPTDS DPAAFDVLEE YLTFFDADGD  360
NVDLSFDPSE ILESESSVPD QAVLPEVVGG ATEQASPSKH TSDLRYDNEA SSSSSMQRSE  420
DPKPESDLKY PFLKHTSHML GSIPAPFASQ FTSKDAALHI NSAPQASSSV RVTAGMIVIR  480
NTTLNGDEMN SLYGKNSVLN LIYLYGIVEG DIYSSQLSPT SGAHHSKSGS LMSRYFVYFF  540
ILFWLLILSV SFKVARCIHS R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	1e-150	NAC family protein