PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023541345.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 373aa MW: 42228.4 Da PI: 8.6739

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023541345.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	157.8	4.6e-49	29	155	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 + pGfrF+Ptdeel+++yLkkk+eg + ++ evi e++iyk+ePwdLp k++ ++++ew+fFs+r kky++g++++rat+ gyWkatgk+++v+s XP_023541345.1 29 MFPGFRFSPTDEELISFYLKKKLEGYEKSV-EVIVEIEIYKYEPWDLPaKSIIQSDNEWFFFSPRGKKYPKGNQTRRATDLGYWKATGKERNVKS 122 579**********************999.99***********767778899********************************** PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 +++++g+k+tLvf++grapkge+t+W+mhe+++ XP_023541345.1 123 -GSNVIGTKRTLVFHTGRAPKGERTEWIMHEFNA 155 .99***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
MAAAAAAAAA AAENGISREV QLSMAVSSMF PGFRFSPTDE ELISFYLKKK LEGYEKSVEV 60 IVEIEIYKYE PWDLPAKSII QSDNEWFFFS PRGKKYPKGN QTRRATDLGY WKATGKERNV 120 KSGSNVIGTK RTLVFHTGRA PKGERTEWIM HEFNAKNKAQ DFLAVCRLRR NNEFRQHSCS 180 NRAASSQMNL SSLQAHSGEQ VDFTSESNQK DVAEAVPVES SGDQKDYGSD DFYSDILKDD 240 ILNLDASAPY NAASDLFPLV FHRSDAERKY QQDWNEYLEW LPNQGCANRR IRLKWREAIG 300 AKKLEAMQNG DSRYMVEKSR LSSSELSQSQ LMNTASSVSV VRGYARVMIF ALLILLALFX 360 SRLEVFGMPK GLY

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

MAAAAAAAAA AAENGISREV QLSMAVSSMF PGFRFSPTDE ELISFYLKKK LEGYEKSVEV  60
IVEIEIYKYE PWDLPAKSII QSDNEWFFFS PRGKKYPKGN QTRRATDLGY WKATGKERNV  120
KSGSNVIGTK RTLVFHTGRA PKGERTEWIM HEFNAKNKAQ DFLAVCRLRR NNEFRQHSCS  180
NRAASSQMNL SSLQAHSGEQ VDFTSESNQK DVAEAVPVES SGDQKDYGSD DFYSDILKDD  240
ILNLDASAPY NAASDLFPLV FHRSDAERKY QQDWNEYLEW LPNQGCANRR IRLKWREAIG  300
AKKLEAMQNG DSRYMVEKSR LSSSELSQSQ LMNTASSVSV VRGYARVMIF ALLILLALFX  360
SRLEVFGMPK GLY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22290.1	2e-77	NAC family protein