PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023541313.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 95aa    MW: 10534.9 Da    PI: 9.3971
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023541313.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.21.7e-0922631555
                    HHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH 15 riNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                    +i + +++L++l+P+ + + +s ++s + +L+++++YI+sLq
  XP_023541313.1 22 QIADLISKLQQLIPEiRNARSSSRVSASKVLQETCNYIRSLQ 63
                    799************998999999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 95 aa     Download sequence    
MSSRSSRSRR SSVPSSNISD EQIADLISKL QQLIPEIRNA RSSSRVSASK VLQETCNYIR  60
SLQREVGDLS DRLSELLLST DPESAQAAII RSLLM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28857.13e-17bHLH family protein