PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023541280.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 363aa MW: 40961.4 Da PI: 7.7835

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023541280.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.4	2.4e-52	15	142	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 + pGfrFhPtdeelv +yLk+k+++++l + e ik++diyk++PwdLpk + ++ekewyf+++rd+ky+++ r+nr+t +g+Wkatg+d++++s+ XP_023541280.1 15 MLPGFRFHPTDEELVGFYLKRKIQQRPLLI-ELIKQIDIYKYDPWDLPKLAGSGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSS 108 579**********************999.89***********9888999***********************************9 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ +glkk+Lvfykgra kg+ktdW+mhe+rl XP_023541280.1 109 dGNKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRL 142 56667*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MEERHDHGEN IEELMLPGFR FHPTDEELVG FYLKRKIQQR PLLIELIKQI DIYKYDPWDL 60 PKLAGSGEKE WYFYCPRDRK YRNSARPNRV TGAGFWKATG TDRPIYSSDG NKCIGLKKSL 120 VFYKGRAAKG VKTDWMMHEF RLPSITDPAP TKRFVHKTLL ANDSWAICRI FKKTNSTAQR 180 ALTLSSNPPL SDDIPKANDT FFPTKTPFPS YETHQPSISN AYPCDFVASC KPFNTQTTSR 240 LSHLPILTEA PNTTEEPAET CRVDLSSILL NMSSSVLGDF GIKPTDPIEM HAQQQFISNN 300 PQIMTHEMHA AGEQFGAIRS TAGYPLSFPL SISDLVKSNL IWDSSSSCPS EVSTSLSTSN 360 CYT

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MEERHDHGEN IEELMLPGFR FHPTDEELVG FYLKRKIQQR PLLIELIKQI DIYKYDPWDL  60
PKLAGSGEKE WYFYCPRDRK YRNSARPNRV TGAGFWKATG TDRPIYSSDG NKCIGLKKSL  120
VFYKGRAAKG VKTDWMMHEF RLPSITDPAP TKRFVHKTLL ANDSWAICRI FKKTNSTAQR  180
ALTLSSNPPL SDDIPKANDT FFPTKTPFPS YETHQPSISN AYPCDFVASC KPFNTQTTSR  240
LSHLPILTEA PNTTEEPAET CRVDLSSILL NMSSSVLGDF GIKPTDPIEM HAQQQFISNN  300
PQIMTHEMHA AGEQFGAIRS TAGYPLSFPL SISDLVKSNL IWDSSSSCPS EVSTSLSTSN  360
CYT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26870.1	1e-100	NAC family protein