PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023541177.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | SBP | ||||||||
Protein Properties | Length: 444aa MW: 49760.9 Da PI: 8.9224 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 129.5 | 1.2e-40 | 161 | 237 | 2 | 78 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 CqvegC+ dls+ak+y+r+h+vCe hsk+p+v++ g+e+rfCqqCsrfh +s+fDe+krsCrrrL++hn+rrrk+q+ XP_023541177.1 161 CQVEGCNIDLSNAKDYYRKHRVCESHSKSPKVIIGGIERRFCQQCSRFHGISDFDEKKRSCRRRLSNHNARRRKPQS 237 **************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 444 aa Download sequence |
MEWNARPSLQ WDWENLTVLN PRISGHGDIL HPTNFENKHG INVGSSNSVG DARITGGPFF 60 ELGKTSPKNS KSVSQNSLSI EKSRTTKFTL EGFEPTLEDI DNKYKFVETS ICSCEPMLSL 120 KLGKQAYFEN TSAGNVKKPS VPLMESQATR KRCQNTPSPH CQVEGCNIDL SNAKDYYRKH 180 RVCESHSKSP KVIIGGIERR FCQQCSRFHG ISDFDEKKRS CRRRLSNHNA RRRKPQSKVI 240 SLNPARLSSW DFERRQIDVF SDKLSLIYPI SRTNSAWESE LNTRHPQCGQ YVLKSEQACG 300 STGQLNVSRN EMRCVRAMPY HDTSKLVTFK GPATRVLDAA QDLQRALSLL STDLKGPYEA 360 KLISSDSPNS LSNPNYANQT ATSQSPMDLG IQSLPFASVD SGWPIESQVQ VQVQVHHPSN 420 EGSGLLQDLQ LFKTPCEIGM FSNS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 217 | 234 | KKRSCRRRLSNHNARRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G27360.4 | 2e-46 | SBP family protein |