PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023541045.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | bHLH | ||||||||
Protein Properties | Length: 246aa MW: 28115.1 Da PI: 8.336 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 29.6 | 1.2e-09 | 77 | 126 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h erEr+RR+++ + Lr+llP + ++K ++ Av+YIk+ XP_023541045.1 77 LMHRERERQRRQEMGALYMSLRTLLPLEF--IKGKRAISDQMNGAVNYIKYQ 126 58*************************65..*******************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MFPLQKCEDK CFQISFNPHQ HIIPEDLIFG PQVSVEAHDD SNNNNNNGVN NLGTRGRRKL 60 LQNLDHGVSD QDHQIKLMHR ERERQRRQEM GALYMSLRTL LPLEFIKGKR AISDQMNGAV 120 NYIKYQKKKI KEFEAKRDEL KKLYNSSNDL EISRGQTPIC SFKVSSFDGG LEILIITNDF 180 HGFPLSRILK VIVDQGLDVV RCGSTTMNDK SMHTIQMEVS DSTTLDLSQL GKKLTEAVPQ 240 LKQVTD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25410.1 | 1e-31 | bHLH family protein |