PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023540816.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 168aa    MW: 18520.5 Da    PI: 8.3198
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023540816.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.60.0001260941554
                    HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH 15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    ++ +++  L++l+ +      +K + a++L +A+eYI+ L
  XP_023540816.1 60 KLGERIMALQQLVSPF-----GKTDTASVLLEAMEYIQFL 94
                    6667899999999998.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
MIASSLCNAS AKFPAEVVEV ETMMEQKRNL CSVDESSLTS LTSKRRKADF SISAKEKKDK  60
LGERIMALQQ LVSPFGKTDT ASVLLEAMEY IQFLHEQVKV LSAPYLQSTP TVQLQEMELP  120
YNHGLRNKGL CLVPISCTAG VARSNGADIW APVKTTSPKL EKIISPFN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05710.38e-63bHLH family protein