PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023540777.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family MYB_related
Protein Properties Length: 334aa    MW: 35881.9 Da    PI: 7.8423
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023540777.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding40.85.1e-1399143347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+  ++ + ++lG+g+W+ Iar     Rt+ q+ s+ qky
   XP_023540777.1  99 PWTEEEHRMFLLGLQKLGKGDWRGIARNYVVSRTPTQVASHAQKY 143
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MTRRCSHCSH NGHNSRTCPN RGVKLFGVRL TDGSIRKSAS MGNLSHYAGS GSGALHGGSN  60
NPASPGETAD HGVAADGYAS EDFVPGSSSS CRERKKGVPW TEEEHRMFLL GLQKLGKGDW  120
RGIARNYVVS RTPTQVASHA QKYFIRQTNV SRRKRRSSLF DIVADEPVEN SIAQQEFLSV  180
SSSHAETQSN NPLPTPPTVD EECESMDSTH SNDGESAPAK LDGPQCCYPM VYPAYVAPFF  240
PFSVPFYSGY SAETANKETH EVLKPTAVHS KTPLNVDELI GMSKLSLGES IGHAGPSSLS  300
LKLLEGASRR SAFHAKAASG SENMNSGCSP IHAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.11e-130MYB_related family protein