PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023540585.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family FAR1
Protein Properties Length: 281aa    MW: 32309.6 Da    PI: 7.9923
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023540585.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR191.98.1e-29117204291
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                     fYn+YA++vGF +r+sk ++s+r+g+ + r +vC+keg+r ++k++  k  r+raetr+gC+a++ v+k ++gkw+vtk+++eH+H+l+p
  XP_023540585.1 117 FYNAYATRVGFVIRVSKLSRSRRDGTAIGRALVCNKEGYRMPDKRE--KIVRQRAETRVGCRAMILVRKITSGKWVVTKFVKEHTHPLSP 204
                     ******************************************9988..9**************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MVYGMWGCVY WWEIMKFGAV SVLSLFGRSR KLEFGVDGDS EVVGNSTLVE DSKPLDENET  60
GVSSIERIFD HDQDEKIIQD SSGRNAILDS VPGLPVVQGD EPYIGQEFEN EAAAHAFYNA  120
YATRVGFVIR VSKLSRSRRD GTAIGRALVC NKEGYRMPDK REKIVRQRAE TRVGCRAMIL  180
VRKITSGKWV VTKFVKEHTH PLSPGKSRRD CIYDQYPNEH DKIRELSQQL AVEKKRSATY  240
KRHLEVIFEY IEEHNNNLSR KIQHIVDNVK EMESIEQQNL R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.21e-95FAR1 family protein