PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023540531.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NF-YB
Protein Properties Length: 180aa    MW: 19297.5 Da    PI: 5.7387
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023540531.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB180.31.7e-5619114297
           NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 
                     re+dr+lPianv+rimkk+lP+nakisk+aketvqecvsefisf+t+easdkc++ekrktingddllwa+atlGfedyv+plkvyl+++re+ege
  XP_023540531.1  19 REHDRLLPIANVGRIMKKALPGNAKISKEAKETVQECVSEFISFITGEASDKCHKEKRKTINGDDLLWAMATLGFEDYVDPLKVYLQRFREIEGE 113
                     799*******************************************************************************************9 PP

           NF-YB  97 k 97 
                     k
  XP_023540531.1 114 K 114
                     7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MADSDNDSAG GNHKSPSPRE HDRLLPIANV GRIMKKALPG NAKISKEAKE TVQECVSEFI  60
SFITGEASDK CHKEKRKTIN GDDLLWAMAT LGFEDYVDPL KVYLQRFREI EGEKTTLASR  120
DGGSGSAAAS TAANSAYFDG GAEFGGGMGT MMTMNMPPNV YGSNGPRWDG PAFNSTGRPN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.14e-67NF-YB family protein