PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023540511.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | NF-YB | ||||||||
Protein Properties | Length: 239aa MW: 26146.9 Da PI: 6.3535 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 164.5 | 1.4e-51 | 83 | 179 | 1 | 97 |
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 vreqd+++Pianv rim+++lP++akis+daket+qecvse+isf+t+ea+++cqre+rkt++ +d+lwa+++lGf+dy+epl+v+l++yre e+ XP_023540511.1 83 VREQDQYMPIANVRRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTVEDVLWAIGKLGFDDYIEPLTVFLNRYRESES 177 69*******************************************************************************************99 PP NF-YB 96 ek 97 ++ XP_023540511.1 178 DR 179 86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence |
MECGGSATGG GDGFHSYIRQ QPKPTSALNV LLTANKSSSA NNTHNTNHQQ VNGRNLATNS 60 PVTGSTPASI AATNNEQSQQ CIVREQDQYM PIANVRRIMR RILPSHAKIS DDAKETIQEC 120 VSEYISFITG EANERCQREQ RKTVTVEDVL WAIGKLGFDD YIEPLTVFLN RYRESESDRI 180 RTEPILRRNV DYGPQVGMVP PYGQTFQIGH VPSGMFDAMG GYYDGGGNGG ASSGNGNQL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21970.1 | 4e-63 | NF-YB family protein |