PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023540063.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TALE

Protein Properties

Length: 402aa MW: 44851.4 Da PI: 6.7947

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023540063.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.5	1.3e-09	260	292	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 ++yps +++ LAk++gL+ +qV++WF N R + XP_023540063.1 260 HPYPSDTDKLMLAKQTGLSRSQVSNWFINARVR 292 89*****************************88 PP
2	BELL	59.5	8.1e-20	167	225	4	62
BELL 4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFr 62 l + k+ L+s+l+eV+++Ykqy+ q++ v+ sFe + glg+a+pY++ A kai r+ r XP_023540063.1 167 SLASNKSTLVSMLDEVYRKYKQYYLQIEEVMTSFEYISGLGNAAPYANQAIKAIQRSVR 225 567899************************************************99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 402 aa Download sequence
MADGIESFDH VPQQSRRDKL REQPDRSSFL PFYDPSLISS SDILSTAAAA AAAANNPLFQ 60 FHHPFFDTQI PSSLLPDSNN SVLLNHCYAA FKPEPLSLSL SSHPYLSTVN VPLGPFTGYA 120 SILKGSRFLK PAQQLLEELC DVVGLQRTQS SSATSGSLSD CGVVHHSLAS NKSTLVSMLD 180 EVYRKYKQYY LQIEEVMTSF EYISGLGNAA PYANQAIKAI QRSVRNPGFL DHQPVWRPQR 240 GLPEQAVTVL RGWLFDHFLH PYPSDTDKLM LAKQTGLSRS QVSNWFINAR VRLWKPMVEE 300 IYNLETKQTQ KNCHREEDRN EHPPSRNEPH DIPMGIQDEP FNICYNLSSH SHMASNNNNS 360 GVSLTLGLHQ NNGIGGFPVG YVMGGHFGRD VVGTQLLHDF VG

Sequence ? help Back to Top

Protein Sequence Length: 402 aa Download sequence

MADGIESFDH VPQQSRRDKL REQPDRSSFL PFYDPSLISS SDILSTAAAA AAAANNPLFQ  60
FHHPFFDTQI PSSLLPDSNN SVLLNHCYAA FKPEPLSLSL SSHPYLSTVN VPLGPFTGYA  120
SILKGSRFLK PAQQLLEELC DVVGLQRTQS SSATSGSLSD CGVVHHSLAS NKSTLVSMLD  180
EVYRKYKQYY LQIEEVMTSF EYISGLGNAA PYANQAIKAI QRSVRNPGFL DHQPVWRPQR  240
GLPEQAVTVL RGWLFDHFLH PYPSDTDKLM LAKQTGLSRS QVSNWFINAR VRLWKPMVEE  300
IYNLETKQTQ KNCHREEDRN EHPPSRNEPH DIPMGIQDEP FNICYNLSSH SHMASNNNNS  360
GVSLTLGLHQ NNGIGGFPVG YVMGGHFGRD VVGTQLLHDF VG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02030.1	8e-70	TALE family protein