PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023540062.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | TALE | ||||||||
Protein Properties | Length: 411aa MW: 46141.8 Da PI: 7.13 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 29.5 | 1.3e-09 | 287 | 319 | 22 | 54 |
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 ++yps +++ LAk++gL+ +qV++WF N R + XP_023540062.1 287 HPYPSDTDKLMLAKQTGLSRSQVSNWFINARVR 319 89*****************************88 PP | |||||||
2 | BELL | 71.5 | 1.5e-23 | 167 | 235 | 4 | 72 |
BELL 4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 l + k+ L+s+l+eV+++Ykqy+ q++ v+ sFe + glg+a+pY++ A ka+ F++Lk+ai +q+ XP_023540062.1 167 SLASNKSTLVSMLDEVYRKYKQYYLQIEEVMTSFEYISGLGNAAPYANQAIKAMYAYFQSLKNAILDQL 235 567899************************************************************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 411 aa Download sequence |
MADGIESFDH VPQQSRRDKL REQPDRSSFL PFYDPSLISS SDILSTAAAA AAAANNPLFQ 60 FHHPFFDTQI PSSLLPDSNN SVLLNHCYAA FKPEPLSLSL SSHPYLSTVN VPLGPFTGYA 120 SILKGSRFLK PAQQLLEELC DVVGLQRTQS SSATSGSLSD CGVVHHSLAS NKSTLVSMLD 180 EVYRKYKQYY LQIEEVMTSF EYISGLGNAA PYANQAIKAM YAYFQSLKNA ILDQLKFNKR 240 THGGDYSQRS VRNPGFLDHQ PVWRPQRGLP EQAVTVLRGW LFDHFLHPYP SDTDKLMLAK 300 QTGLSRSQVS NWFINARVRL WKPMVEEIYN LETKQTQKNC HREEDRNEHP PSRNEPHDIP 360 MGIQDEPFNI CYNLSSHSHM ASNNNNSGVS LTLGLHQNNG IGGFPVGNRV E |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G02030.1 | 9e-84 | TALE family protein |