PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023540000.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | NAC | ||||||||
Protein Properties | Length: 245aa MW: 27989.3 Da PI: 5.1586 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 122.1 | 4.8e-38 | 17 | 140 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 ppGfrFhPtdeel+ +yL +++ + +l++ vi+++d +++Pw Lp + ++e yfFs++ k ++g r+t+sgyWk g+d++v+s+ XP_023540000.1 17 PPGFRFHPTDEELLLQYLMRRAFSLPLPA-PVISDIDGGRFDPWVLPGN---WQRERYFFSTKFPKFPNGGSFIRITASGYWKPVGNDRAVISSk 107 9***************************9.89***************43...46899**********************************9985 PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++lvg kk+Lvfy g+ p g ktdW+mheyrl XP_023540000.1 108 QDQLVGWKKSLVFYVGKFPYGMKTDWIMHEYRL 140 7788***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MAANRIAYLK NGALRFPPGF RFHPTDEELL LQYLMRRAFS LPLPAPVISD IDGGRFDPWV 60 LPGNWQRERY FFSTKFPKFP NGGSFIRITA SGYWKPVGND RAVISSKQDQ LVGWKKSLVF 120 YVGKFPYGMK TDWIMHEYRL VDFPPSAMNA QLPPFNPNLV LCRIFFKKRD IRENDENNNV 180 GSRPVLRNFL RATNNSELNP SPTSSSSSGS SGVTDITLGN SDDDDDDDDY EEEDDEETSS 240 FYKNT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 7e-63 | NAC family protein |