PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023539881.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

Nin-like

Protein Properties

Length: 973aa MW: 107235 Da PI: 5.0371

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023539881.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.3	3.7e-29	585	635	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek++sl++l++yFs+++kdAAk++gvc+T+LKriCRq+GI RWP+Rki+++ XP_023539881.1 585 EKNVSLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGILRWPSRKINKV 635 89***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 973 aa Download sequence
MENPFSSKEE GMMGYWGPSR TQAETMNSTD AGMRILSPED VLPTFSDMMN FDSYAAIDQI 60 FTSCGFSSMP QMSTCGSIEG LSFVEGGCHE GFPLNEHGGA SISMANSFTC GDKAMFQLPD 120 TEFGVSNVSD NANKVDSKSN DVPVDMDSCL ISRPFGWSLD EKMLRVLSMF KESSPGGILA 180 QVWVPVKHGD QFFLSTSEQP YLLDQMLTGY REVSRSFTFS AEGKLGSLLG LPGRVFTSKL 240 PEWTSNVRYY SDHEYLRMQH AIGHDVYGSI ALPVFNNEVE KSCCAVLEVV TTKEKPNFDA 300 EIDIVSQALE TVSLSTVPPP RLYSQCLKKN QRAALAEIVD VLRVVCHAHR LPLALTWIPC 360 CYSFDAVDEV ARVRVKENNI NPEEKFVLCI EETACYVNDK STQGFVHACL EHHLEEGQGI 420 AGKALQSNHP FFYPDVKAYD INKYPLVHHA RKFGLNAAVA IRLRSMYTGN DDYILEFFLP 480 VNMKGAAEQQ LLLNNLSVTM QRMCRSLRTV SKEELIGAED SVVDFQSGLI GKSTTTSMRN 540 SQSTVTDSET RVSNSINNGA EAECPEKQMT DGSWKQGEKK RSTSEKNVSL SVLQQYFSGS 600 LKDAAKSIGV CPTTLKRICR QHGILRWPSR KINKVNRSLR KIQTVLDSVK GVEGGLKFDP 660 TTGCLMAGSL IPELNAQNSL LFSDNNPAIP NLDLFLHDVN SVPSAPFNTQ NSAIKLEMDE 720 SSVSISQRTS SRGVLIPEKE PNVRQHDCSE GLESAGVDAA SCQLADLDMM SWDVQGNASV 780 SIAAKKSDRL DFVKNDLRSG DADCQFMAKS SISFAAADEV GTVLNEHYQP TTSSMTDSSN 840 GSGLMIHGSS SSSQSVERKH LPEKVGSVDS ESKIIVKASY KDDTVRFKFD PCLGYLQLYE 900 EVGMRFKLNQ GTFQLKYLDD EKEWVMLVSN SDLQECLEVM DEIGTRNVRF LVRDIVCAVG 960 SSGSSSCFLS GCS

Sequence ? help Back to Top

Protein Sequence Length: 973 aa Download sequence

MENPFSSKEE GMMGYWGPSR TQAETMNSTD AGMRILSPED VLPTFSDMMN FDSYAAIDQI  60
FTSCGFSSMP QMSTCGSIEG LSFVEGGCHE GFPLNEHGGA SISMANSFTC GDKAMFQLPD  120
TEFGVSNVSD NANKVDSKSN DVPVDMDSCL ISRPFGWSLD EKMLRVLSMF KESSPGGILA  180
QVWVPVKHGD QFFLSTSEQP YLLDQMLTGY REVSRSFTFS AEGKLGSLLG LPGRVFTSKL  240
PEWTSNVRYY SDHEYLRMQH AIGHDVYGSI ALPVFNNEVE KSCCAVLEVV TTKEKPNFDA  300
EIDIVSQALE TVSLSTVPPP RLYSQCLKKN QRAALAEIVD VLRVVCHAHR LPLALTWIPC  360
CYSFDAVDEV ARVRVKENNI NPEEKFVLCI EETACYVNDK STQGFVHACL EHHLEEGQGI  420
AGKALQSNHP FFYPDVKAYD INKYPLVHHA RKFGLNAAVA IRLRSMYTGN DDYILEFFLP  480
VNMKGAAEQQ LLLNNLSVTM QRMCRSLRTV SKEELIGAED SVVDFQSGLI GKSTTTSMRN  540
SQSTVTDSET RVSNSINNGA EAECPEKQMT DGSWKQGEKK RSTSEKNVSL SVLQQYFSGS  600
LKDAAKSIGV CPTTLKRICR QHGILRWPSR KINKVNRSLR KIQTVLDSVK GVEGGLKFDP  660
TTGCLMAGSL IPELNAQNSL LFSDNNPAIP NLDLFLHDVN SVPSAPFNTQ NSAIKLEMDE  720
SSVSISQRTS SRGVLIPEKE PNVRQHDCSE GLESAGVDAA SCQLADLDMM SWDVQGNASV  780
SIAAKKSDRL DFVKNDLRSG DADCQFMAKS SISFAAADEV GTVLNEHYQP TTSSMTDSSN  840
GSGLMIHGSS SSSQSVERKH LPEKVGSVDS ESKIIVKASY KDDTVRFKFD PCLGYLQLYE  900
EVGMRFKLNQ GTFQLKYLDD EKEWVMLVSN SDLQECLEVM DEIGTRNVRF LVRDIVCAVG  960
SSGSSSCFLS GCS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43500.1	0.0	Nin-like family protein