PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023539674.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | bHLH | ||||||||
Protein Properties | Length: 235aa MW: 25854.5 Da PI: 5.9114 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 32.1 | 2.1e-10 | 80 | 127 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++ rE+ RRdr+N++f eL l + ++ K +Ka+iL Av+ + +L XP_023539674.1 80 SKACREKLRRDRLNDKFLELGATLEPG---RALKTDKAAILIDAVRMVTQL 127 6789**********************9...9***************99988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
MVSPETTNWL FDYALIDDIP VPDDANFSAP TAGFSWSMQP FNASSDVSAE IEGSLLESDG 60 LKEPGSKKRV RTESSCASSS KACREKLRRD RLNDKFLELG ATLEPGRALK TDKAAILIDA 120 VRMVTQLRGE AQMLKDSNTS LLEKIKDLKA EKNELRDEKH RLKLEKEKLE QQLKATNSQP 180 GFMPPAIPAT FAAQGQAPGN KLVPFIGYPG VAMWQFMPPA AVDTSQDHVL RPPVA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G54680.1 | 6e-94 | bHLH family protein |