PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023539674.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 235aa    MW: 25854.5 Da    PI: 5.9114
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023539674.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.12.1e-1080127454
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++  rE+ RRdr+N++f eL   l +    ++ K +Ka+iL  Av+ + +L
  XP_023539674.1  80 SKACREKLRRDRLNDKFLELGATLEPG---RALKTDKAAILIDAVRMVTQL 127
                     6789**********************9...9***************99988 PP

Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MVSPETTNWL FDYALIDDIP VPDDANFSAP TAGFSWSMQP FNASSDVSAE IEGSLLESDG  60
LKEPGSKKRV RTESSCASSS KACREKLRRD RLNDKFLELG ATLEPGRALK TDKAAILIDA  120
VRMVTQLRGE AQMLKDSNTS LLEKIKDLKA EKNELRDEKH RLKLEKEKLE QQLKATNSQP  180
GFMPPAIPAT FAAQGQAPGN KLVPFIGYPG VAMWQFMPPA AVDTSQDHVL RPPVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.16e-94bHLH family protein