PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023539601.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 441aa MW: 50656.9 Da PI: 7.8248

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023539601.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	99.8	3.8e-31	13	136	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lp+G+ F+Pt+eel+++yLk+k+ g+++ + ++ike+d+yk++P++Lp k + +++ ew+fF + + +++r+t++g W++tg ++++ XP_023539601.1 13 LPVGCGFRPTEEELITHYLKNKILGQEFLV-RFIKEIDLYKFDPEQLPdKsYFPSSNFEWFFFRANTS------NNKRTTATGGWRSTGDPRRIK 100 799**********************999.89************5334444555999987655......5689999************ PP NAM 94 sk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ ++e++ + ++ vf++g+ ++ kt+Wv+hey+l XP_023539601.1 101 AReTNEVIATCHIYVFHRGKGGNAIKTNWVIHEYKL 136 99667779999*********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 441 aa Download sequence
MAAIDEFPFL SSLPVGCGFR PTEEELITHY LKNKILGQEF LVRFIKEIDL YKFDPEQLPD 60 KSYFPSSNFE WFFFRANTSN NKRTTATGGW RSTGDPRRIK ARETNEVIAT CHIYVFHRGK 120 GGNAIKTNWV IHEYKLHTLT DITSQPFIIF RLKKNAEERH VSIRDQEDGQ NSTVASHRTK 180 KVKRGGEIRE INRDEQSICK PLGSCTQQPV NAYDDNGEVN MQPIQLGDGD SAYGNMTEFI 240 NKTVIWDDIF NHEVTSNMCG SLRRSEPQPG LMDTQQSESQ LDYLRNFVHD DKNWDEMTSN 300 NQEWEGMYCQ FQGGFSSETN SNTAFGLPYN HTMKRLERTP LPPRRLRLSD VEKHIEIGNS 360 PQLSGTDSNN ELKSEAGNKA TKWATAQHCC SSKNRFSYIL TTKRIHHNST LPSLVYVAKA 420 LLGVVVLVMF AQDVLLYRYR R

Sequence ? help Back to Top

Protein Sequence Length: 441 aa Download sequence

MAAIDEFPFL SSLPVGCGFR PTEEELITHY LKNKILGQEF LVRFIKEIDL YKFDPEQLPD  60
KSYFPSSNFE WFFFRANTSN NKRTTATGGW RSTGDPRRIK ARETNEVIAT CHIYVFHRGK  120
GGNAIKTNWV IHEYKLHTLT DITSQPFIIF RLKKNAEERH VSIRDQEDGQ NSTVASHRTK  180
KVKRGGEIRE INRDEQSICK PLGSCTQQPV NAYDDNGEVN MQPIQLGDGD SAYGNMTEFI  240
NKTVIWDDIF NHEVTSNMCG SLRRSEPQPG LMDTQQSESQ LDYLRNFVHD DKNWDEMTSN  300
NQEWEGMYCQ FQGGFSSETN SNTAFGLPYN HTMKRLERTP LPPRRLRLSD VEKHIEIGNS  360
PQLSGTDSNN ELKSEAGNKA TKWATAQHCC SSKNRFSYIL TTKRIHHNST LPSLVYVAKA  420
LLGVVVLVMF AQDVLLYRYR R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17260.1	4e-31	NAC family protein