PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023539413.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TALE

Protein Properties

Length: 703aa MW: 77232.6 Da PI: 7.7426

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023539413.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.3	6.3e-09	399	436	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gLt qV++WF N R + XP_023539413.1 399 FEHflHPYPKDSDKHMLAKQTGLTRGQVSNWFINARVR 436 664459******************************88 PP
2	BELL	117.5	6.3e-38	263	334	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 erqe+q+kk kL+s+l+eV++rY++y++q+++vis Fe +ag gsa+ Yt+lAl++iS++FrcLkdai++qi XP_023539413.1 263 ERQEIQMKKEKLISMLDEVEQRYRHYHHQMKIVISTFEKAAGAGSARTYTALALQTISKQFRCLKDAITGQI 334 79*********************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 703 aa Download sequence
MATYLHANSE FQSAADAGLQ TLVLMNPGYV QFSDTPPPPS SPPPSHPNLV FFNSASPANA 60 YSAQTLPHPP SHAQQFVGIP LPSTTTASPT SQDHNLYSFN THHDISSLHG FVPRVQYDIW 120 KPINPSTTAR ESSRAQQGLS LSLSSQQGFG SREIQSQTHQ AVSGEENVRI SGGSSSSASG 180 ITNGAAGIQG VLISSKYLKA AVELLDEVVN VTQNGIKNES SPKKAAGNQN KMNGDASAAA 240 TTADGSFEGD ADRKRAADLT TAERQEIQMK KEKLISMLDE VEQRYRHYHH QMKIVISTFE 300 KAAGAGSART YTALALQTIS KQFRCLKDAI TGQIKAANKS LGEEEYNGRK MEGSRLKFVD 360 NHLRQQRALQ QLGMIQHNAW RPQRGLPERS VSILRAWLFE HFLHPYPKDS DKHMLAKQTG 420 LTRGQVSNWF INARVRLWKP MVEEMYLEEV KEQEQNGGGG LAPSTAAEKS NDDSDSKSPN 480 SKQENSPNQN VHPSVSISTS SDGNVRNPSG FTLIGTSSEL DGITQRSPKK QRGTEILYSS 540 NNNNNNNNVQ FINMDIKLRE EEQQNQNQNL HHLPMKFDEE RQNRDGYSFL GQPHFNMAGF 600 GQYPIGEIGR FDADQFTPRF SGNNGVSLSL GLPHGENLSV NAATHQAFLP NQSIHLGRRT 660 EMGKPTDFSA INASTPHSST AFETINIQNG KRFAAQLLPD FVA

Sequence ? help Back to Top

Protein Sequence Length: 703 aa Download sequence

MATYLHANSE FQSAADAGLQ TLVLMNPGYV QFSDTPPPPS SPPPSHPNLV FFNSASPANA  60
YSAQTLPHPP SHAQQFVGIP LPSTTTASPT SQDHNLYSFN THHDISSLHG FVPRVQYDIW  120
KPINPSTTAR ESSRAQQGLS LSLSSQQGFG SREIQSQTHQ AVSGEENVRI SGGSSSSASG  180
ITNGAAGIQG VLISSKYLKA AVELLDEVVN VTQNGIKNES SPKKAAGNQN KMNGDASAAA  240
TTADGSFEGD ADRKRAADLT TAERQEIQMK KEKLISMLDE VEQRYRHYHH QMKIVISTFE  300
KAAGAGSART YTALALQTIS KQFRCLKDAI TGQIKAANKS LGEEEYNGRK MEGSRLKFVD  360
NHLRQQRALQ QLGMIQHNAW RPQRGLPERS VSILRAWLFE HFLHPYPKDS DKHMLAKQTG  420
LTRGQVSNWF INARVRLWKP MVEEMYLEEV KEQEQNGGGG LAPSTAAEKS NDDSDSKSPN  480
SKQENSPNQN VHPSVSISTS SDGNVRNPSG FTLIGTSSEL DGITQRSPKK QRGTEILYSS  540
NNNNNNNNVQ FINMDIKLRE EEQQNQNQNL HHLPMKFDEE RQNRDGYSFL GQPHFNMAGF  600
GQYPIGEIGR FDADQFTPRF SGNNGVSLSL GLPHGENLSV NAATHQAFLP NQSIHLGRRT  660
EMGKPTDFSA INASTPHSST AFETINIQNG KRFAAQLLPD FVA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35940.1	1e-137	TALE family protein