PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023539408.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | MYB | ||||||||
Protein Properties | Length: 255aa MW: 28863.5 Da PI: 8.3704 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.3 | 2.3e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W +eEd++l+ ++++G +W++ ++ g+ R++k+c++rw +yl XP_023539408.1 14 KGPWAAEEDQILISFIQKHGHANWRALPKLAGLLRCGKSCRLRWINYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 51 | 3.2e-16 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T eE+ ++ ++++lG++ W++Ia+ ++ gRt++++k++w+++l XP_023539408.1 67 RGNFTREEQNTILYLHEKLGNR-WSAIAAQLP-GRTDNEIKNFWHTHL 112 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence |
MVRAPCCQKT GLKKGPWAAE EDQILISFIQ KHGHANWRAL PKLAGLLRCG KSCRLRWINY 60 LRPDIKRGNF TREEQNTILY LHEKLGNRWS AIAAQLPGRT DNEIKNFWHT HLKKRAMKKQ 120 SNDSAIVEPK SKPPQKLNSS NQYEFPSSSL DHSSVTDSPA AVWGGCNEIE KEQRIEIFEA 180 FHQTGGGVWA EEASNGPMFK SSAFNDEEQV QSLFRAMDSM EFGCYYDNGS SMNDGMEFWY 240 SVFVKAGGSL NHPAS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31180.1 | 7e-72 | MYB family protein |