PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023538801.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 379aa    MW: 41969.7 Da    PI: 6.3494
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023538801.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.72.1e-08210257455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++iN ++  L+el+P +    +k    a +L + +++++sLq
  XP_023538801.1 210 KHSLAERARREKINARMKLLQELVPGC----NKISGTALVLDEIINHVQSLQ 257
                     699***********************9....888999999999999999998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 379 aa     Download sequence    
MEIEVGTVGG SSPIGRQFNY TGLESHQFCE EIHGLMTIPS ENASSFTALL ELPATQALEL  60
LHSTDSAEVK KDDSVHHRVK DVPKPYFSAL NCNLTFPTNS PLNEHDAKFS VVAEEHSPET  120
TSSVPLNSSV SLEKVKNEPT IETDSNPNHS YPKISDPTVE NNTNQRSVKR KEREKKGKGS  180
SKKSKNESQE DAEKLPYVHV RAGRGQATDK HSLAERARRE KINARMKLLQ ELVPGCNKIS  240
GTALVLDEII NHVQSLQRQV EFLSMRLAAV NPRVDFNIDS ILAAENEPVH ESNLPTMITP  300
LMWSEISPSG SRQQYQQQWH FDAAVVNQLA GARDEHNLHT FSTPENSLLS YDSSANSASV  360
RSKSVEDGGV KAALYFSCR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57800.22e-89bHLH family protein