PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023538331.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

ARR-B

Protein Properties

Length: 515aa MW: 58047.5 Da PI: 4.9976

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023538331.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	77.9	1.2e-24	156	209	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++W+ +LH++Fveav+q+ G +k Pk+il+lm+v+ Lt+e+v+SHLQkYRl XP_023538331.1 156 KARVVWSVDLHQKFVEAVNQI-GFDKVGPKKILDLMNVPWLTRENVASHLQKYRL 209 68*****************.9*****************************8 PP
2	Myb_DNA-binding	38.8	2.2e-12	158	208	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ ++++++v+av+q G + +k+I m+ +t++++ s++qky+ XP_023538331.1 158 RVVWSVDLHQKFVEAVNQIGFDkvGPKKILDLMNvPWLTRENVASHLQKYR 208 678***********************************************7 PP
3	Response_reg	56.7	1.3e-19	5	85	30	109
SSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHHHH CS Response_reg 30 ddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeelvk 109 ++eal ll+e++ +D+++ D++mp+mdG++ll++ e +lp+i+++ ge + + + ++ Ga d+l Kp+ ++el++ XP_023538331.1 5 CLAREALSLLRERKdgYDIVISDVNMPDMDGFKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRN 85 557899**988889******************6644.8*********************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 515 aa Download sequence
MTTCCLAREA LSLLRERKDG YDIVISDVNM PDMDGFKLLE HVGLEMDLPV IMMSVDGETS 60 RVMKGVQHGA CDYLLKPIRM KELRNIWQHV LRKKIQEGRD IEGHDVFEGL QILRNGSDRY 120 DDSQFLRVEE LFSVRKRKDV DKYEEKEFGE TCSTKKARVV WSVDLHQKFV EAVNQIGFDK 180 VGPKKILDLM NVPWLTRENV ASHLQKYRLY LSRLQKENDP KACFVVGMKQ TDSSLKDGDG 240 NFSVCSSLVV PQTDVTNSSF SFSGDNFLQN VDSIGCEADR KRVVQEQTSE PKRAAATELI 300 KTRCTHMKFN NSFASVESEG KLAACYPWVE APQMKLKQES KPHQVQINQL PSVSSISSGR 360 SATEKDKGSS IESKAPFSED CSQQMVHLNP PKATTDSFSG KAKSFDEIND HFEPISTATA 420 PLGVKNQNVI DLSSISTDLG SGFPFSSFDE DLQGYLIQDG CYPKNLEQII EFPDYGDPGI 480 FTEGPTHLYD AMRFGYEYSY DPTEYPVIDE GLFIA

Sequence ? help Back to Top

Protein Sequence Length: 515 aa Download sequence

MTTCCLAREA LSLLRERKDG YDIVISDVNM PDMDGFKLLE HVGLEMDLPV IMMSVDGETS  60
RVMKGVQHGA CDYLLKPIRM KELRNIWQHV LRKKIQEGRD IEGHDVFEGL QILRNGSDRY  120
DDSQFLRVEE LFSVRKRKDV DKYEEKEFGE TCSTKKARVV WSVDLHQKFV EAVNQIGFDK  180
VGPKKILDLM NVPWLTRENV ASHLQKYRLY LSRLQKENDP KACFVVGMKQ TDSSLKDGDG  240
NFSVCSSLVV PQTDVTNSSF SFSGDNFLQN VDSIGCEADR KRVVQEQTSE PKRAAATELI  300
KTRCTHMKFN NSFASVESEG KLAACYPWVE APQMKLKQES KPHQVQINQL PSVSSISSGR  360
SATEKDKGSS IESKAPFSED CSQQMVHLNP PKATTDSFSG KAKSFDEIND HFEPISTATA  420
PLGVKNQNVI DLSSISTDLG SGFPFSSFDE DLQGYLIQDG CYPKNLEQII EFPDYGDPGI  480
FTEGPTHLYD AMRFGYEYSY DPTEYPVIDE GLFIA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67710.1	2e-99	ARR-B family protein