PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023538062.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 233aa MW: 26241 Da PI: 10.0134 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 48.8 | 1.3e-15 | 131 | 220 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+k +++s+v+ +l lp +f++eh + +++ +tl de g ++ + + rk++ +++GWk+F a++L +gD v+F+l++ ++++v XP_023538062.1 131 FIKSMVRSHVSGCFWLGLPSHFCKEHL-P-TNDGVMTLIDEGGDEYPIIYLARKTG----FSGGWKGFSVAHKLADGDAVIFQLIK--PTTCKVY 217 89************************4.2.33447***************555555....99*********************997..6667899 PP EE- CS B3 96 vfr 98 +fr XP_023538062.1 218 IFR 220 987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 233 aa Download sequence |
MGIANLSYEE CRRKRVEENK KRMDALNLPL LSQALIDSSP SKSKSKSSPS KQAKHREMKK 60 QLVVVRRSSR VAKQPGPVYA EVLVNRVAIP KRFSSARDYP DHFFASDEAR KNAFERAERL 120 QSVLEPNYPT FIKSMVRSHV SGCFWLGLPS HFCKEHLPTN DGVMTLIDEG GDEYPIIYLA 180 RKTGFSGGWK GFSVAHKLAD GDAVIFQLIK PTTCKVYIFR VGDLKEDSDS NSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G42700.1 | 2e-64 | B3 family protein |