PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023537958.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 242aa MW: 28105.2 Da PI: 4.7158 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 57.1 | 3.1e-18 | 46 | 98 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++++t +q++ Le+ F+ ++++ +e++ ++A+++gL rqV vWFqNrRa+ k XP_023537958.1 46 KRRLTLDQVRMLERTFNAENKLEHERKVQIAEEIGLRPRQVAVWFQNRRARSK 98 568999*********************************************99 PP | |||||||
2 | HD-ZIP_I/II | 118.3 | 4.2e-38 | 45 | 136 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 kkrrl+ +qv++LE++F++e+kLe+erKv++a+e+gl+prqvavWFqnrRAR ktk++E dye+L ++yd+lk++ ++L k ++eL++e+++ XP_023537958.1 45 KKRRLTLDQVRMLERTFNAENKLEHERKVQIAEEIGLRPRQVAVWFQNRRARSKTKKIEIDYESLNAEYDKLKNDFDSLLKVNHELKAEVDQ 136 9**************************************************************************************99976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MDSKTTHFLP LPESLPSLWI SDSCSSMEGE FSQPQVKADR NRGGKKRRLT LDQVRMLERT 60 FNAENKLEHE RKVQIAEEIG LRPRQVAVWF QNRRARSKTK KIEIDYESLN AEYDKLKNDF 120 DSLLKVNHEL KAEVDQLRDK WAATEKMKNP YEPVGDFYKV EMGSSRQEQG SRSSSKSDVF 180 YAESPTRENQ SRSGNFLRDE EEDDELGYLG ILEDELSADE LMDSFNVMSS AAEDQSFCFW 240 SF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01470.1 | 9e-34 | HD-ZIP family protein |