PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023537614.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | bHLH | ||||||||
Protein Properties | Length: 377aa MW: 41149.8 Da PI: 5.6865 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 50.9 | 2.7e-16 | 197 | 243 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn+ E+rRR+riN+++ L+ l+P++ K +Ka++L +A+eY+k+Lq XP_023537614.1 197 VHNMSEKRRRRRINEKMKALQNLIPNS-----NKTDKASMLDEAIEYLKQLQ 243 6*************************7.....5******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 377 aa Download sequence |
MADLYGTSPS SDVVGLPHDP ENFSSFINQH LQTTTSSASS PSCVSFKNKF MPFLHSQPPW 60 HSSSLFSRRR EESTSVAGLS CMLDFPQTRF QLSRVLNHAQ LDSRFGDASY LAVNSTCAAV 120 KLSDPGDFVK ESSDNNVFSS SVAVDSDTNA PFKRRGLSSE NDLGDFSCDS EGADVPEAPS 180 STDLPRSSSK RSRSAEVHNM SEKRRRRRIN EKMKALQNLI PNSNKTDKAS MLDEAIEYLK 240 QLQLQVQMLS MRNGSSLQPM CLPGMLQPVQ LPQMGLDFDV GNAFLASRRG INALSPGNEG 300 CPMQSTFNLS NKCSLSDQSL AIPSVPNITT SETTFGFESA IQAYDGQFDL SSNFKEAQPA 360 TQLDCCAQTR KDSANAS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 203 | 208 | KRRRRR |
2 | 203 | 209 | KRRRRRI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36930.1 | 1e-39 | bHLH family protein |