PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023537520.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | bHLH | ||||||||
Protein Properties | Length: 313aa MW: 35061.8 Da PI: 8.1267 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 15.7 | 2.7e-05 | 193 | 232 | 11 | 55 |
HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R +++ ++++ L++l+ + +K + a++L +A+ YI+ Lq XP_023537520.1 193 IRKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAISYINFLQ 232 57788999*********998.....8*****************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 313 aa Download sequence |
MDFSANLHHQ LQLENQLLLG SGNGHAWNPD VTFSPSCEFE PNFHLQDMNP ATIIDGESCY 60 TYTSLQHYFH GSKDKKFIEK GEEASASSPK TNGTLNSHCC SFEDLNKIAQ SCCCCSTKIH 120 PTLNVSSRQP LMAELSSFFG FDHTVPFQQS TKMPNHEITQ AKRPYSLKQQ KTIEAPPKKP 180 RVEPRATCPP LKIRKEKLGD RIAALQQLVA PFGKTDTASV LMEAISYINF LQNQVEMLSH 240 SYMKSCRSKN YKTTCRDESN EKDKKPESDL KAKGLCLVPT ACISYLPEDT STGGRIGNIW 300 PPLTAASFNR RTF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G27660.1 | 2e-43 | bHLH family protein |