PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023537519.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 313aa    MW: 35061.8 Da    PI: 8.1267
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023537519.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.72.7e-051932321155
                     HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      R +++ ++++ L++l+ +      +K + a++L +A+ YI+ Lq
  XP_023537519.1 193 IRKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAISYINFLQ 232
                     57788999*********998.....8*****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MDFSANLHHQ LQLENQLLLG SGNGHAWNPD VTFSPSCEFE PNFHLQDMNP ATIIDGESCY  60
TYTSLQHYFH GSKDKKFIEK GEEASASSPK TNGTLNSHCC SFEDLNKIAQ SCCCCSTKIH  120
PTLNVSSRQP LMAELSSFFG FDHTVPFQQS TKMPNHEITQ AKRPYSLKQQ KTIEAPPKKP  180
RVEPRATCPP LKIRKEKLGD RIAALQQLVA PFGKTDTASV LMEAISYINF LQNQVEMLSH  240
SYMKSCRSKN YKTTCRDESN EKDKKPESDL KAKGLCLVPT ACISYLPEDT STGGRIGNIW  300
PPLTAASFNR RTF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.12e-43bHLH family protein