PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023537464.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | MYB | ||||||||
Protein Properties | Length: 472aa MW: 53136.2 Da PI: 6.8406 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47.3 | 4.9e-15 | 22 | 66 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +WT++Ed++l + ++q+G+++W+ Ia+++ +t qc+ rw++yl XP_023537464.1 22 SWTQQEDDILREQINQHGTENWAIIASKFK-DKTTRQCRRRWYTYL 66 6****************************9.*************97 PP | |||||||
2 | Myb_DNA-binding | 45.2 | 2.2e-14 | 72 | 115 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g W++eEd+ll +a k +G++ W+ Ia+ + gRt++ +k+r+ + XP_023537464.1 72 KGGWSPEEDLLLCEAQKIFGNR-WTEIAKVVS-GRTDNAVKNRFTT 115 688*******************.*********.**********976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 472 aa Download sequence |
MQDTKKKLAT EDCKKKERHI VSWTQQEDDI LREQINQHGT ENWAIIASKF KDKTTRQCRR 60 RWYTYLNSDF KKGGWSPEED LLLCEAQKIF GNRWTEIAKV VSGRTDNAVK NRFTTLCKKR 120 AKYEALAKEN SSSFINHNNK RVLFQKGSND VSSETSQSGK RIRRAHISHT TESCSLDDGL 180 KKPCSAMDQQ LRAPFAVLVE NVHSIDNLPA EFPMNDAEGL KTTQGNKNQE TFIKKDDPKV 240 TALTQQAELL SSLALKVNSE NTDQSLENAW KILQNFLSRT KENDIPKYVT PDIDLQVEDT 300 KGSVEDLRSS NDGSQWRESN LHESPGSSEY STGSTLVSQT AEEKIDQSQP EIGTHHQEPK 360 FESGSTCTGE QNNGESEKEI LPKTNLEREA FKCCNERKID TIASSFSSSE FSSPMHVIPL 420 FRSLAAGIPS PQFSESERSF LLKTLGVESP SLNPSVNPSQ PPPCKRALLQ SL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14350.1 | 1e-168 | MYB family protein |