PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023536970.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 849aa MW: 92715.4 Da PI: 6.0047 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 57.6 | 2.1e-18 | 28 | 85 | 4 | 57 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++t+eq+e+Le++++++++ps +r++L + + +++ +q+kvWFqNrR +ek+ XP_023536970.1 28 YVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCpilaNIEPKQIKVWFQNRRCREKQ 85 5789****************************************************97 PP | |||||||
2 | START | 150.8 | 1.2e-47 | 169 | 376 | 2 | 204 |
HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS START 2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 +aee ++++++ka+ ++ Wv+++ +++g++++ +f+ s+++sg a+ra+g+v +++ e+l+d++ W ++++++e+ + +g g+++l XP_023536970.1 169 IAEEILAAFLSKATGTAIDWVQMPGMKPGPDSVGIFAVSQSCSGVAARACGLVSLEPM-KIDEILKDRPSWFRDCRSVEVFTTFPTGngGTIELV 262 789999****************************************************.8999999999*****************999****** PP EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS START 95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185 +++ +a+++l+p Rdf+++Ry+++l+ g ++++++S++ p+ +++vRae+lpSg+li+p+++g+s +++v+h +l+ ++++++r+l+ XP_023536970.1 263 YTQVYAPTTLAPaRDFWTLRYTKTLENGNLAVCERSLSGSGTGPNsasAAQFVRAEMLPSGYLIRPCDGGGSIIHIVDHLNLEPGSVPEVVRPLY 357 *************************************98877777688999******************************************** PP HHHHHHHHHHHHHHTXXXX CS START 186 ksglaegaktwvatlqrqc 204 +s+ a ++k++ a++++ + XP_023536970.1 358 ESSKAVAQKMTIAAFRYVR 376 *************998865 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 849 aa Download sequence |
MAMAMATAHH RESGDGGIDG HLDSTGKYVR YTTEQVEALE RVYAECPKPS SLRRQQLVRD 60 CPILANIEPK QIKVWFQNRR CREKQRKEAS RLQSLNSKLT AMNKLLMEEN DRLQKQVSQL 120 VCENGSMRQH LQTANAAAAP ITDASCDTVA TAPQHLLRDA SSPAGLLSIA EEILAAFLSK 180 ATGTAIDWVQ MPGMKPGPDS VGIFAVSQSC SGVAARACGL VSLEPMKIDE ILKDRPSWFR 240 DCRSVEVFTT FPTGNGGTIE LVYTQVYAPT TLAPARDFWT LRYTKTLENG NLAVCERSLS 300 GSGTGPNSAS AAQFVRAEML PSGYLIRPCD GGGSIIHIVD HLNLEPGSVP EVVRPLYESS 360 KAVAQKMTIA AFRYVRQVAQ ETSGEVVYSL GRQPAVLRTF SQRLSRGFNE AVNGFNDDGW 420 SLMNCDGAED VSLAINSSKN VNTSYDPVNS LAFHAGVLCA KASMLIQNVP PIALIRFLRE 480 HRSEWADFNV DAYSAASLKT GSYVYPGMRP TRFTGSQIIM PLGHTIEQEE LLEVVRLESH 540 PLAQEDTFMS RDVHLLQMCT GIDENAVGAC SELVFAPINE MFPDDAVLLP SGFRIIPLHS 600 ETGDSKHTWK NSNRTMDLTS NLEVGSSASQ DAAAASTSNF RSVLTIAFQF SFGSNLQDDV 660 AAMARQYVRS VVSAVQRVAV AISPSGLSLP SERRLSSACP EALTLARWIC YGYRCHTGTE 720 LVLSDSVDGD SVLKHLWNHQ DAILCCSLKS LPPVFMFANQ AGLDMLETTL VALQDITLDK 780 ILGDSALKAF SADFSNLMHQ GFAYIPAGIC ISTMGRHASF EQAIAWKVLA EDESTVHCLA 840 FSFVNWSFL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60690.1 | 0.0 | HD-ZIP family protein |