PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023536871.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | bHLH | ||||||||
Protein Properties | Length: 294aa MW: 31792.2 Da PI: 7.2551 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 33.9 | 5.6e-11 | 176 | 223 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++YI+sLq XP_023536871.1 176 SHSLAERARREKISDRMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 223 8*************************9....677*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 294 aa Download sequence |
MDPPTLMNQG SFPNDANANA NATAYNLSEI WQFPINGGTG VEESGGGLGL RMAQFAHNLG 60 QFGEISMENP EVSRGDPVSQ RVVGHGHGGS KKRRDAELDS AKASSTSNGN NGNSGGANVS 120 AGKRLKTAAC RDDNHAFKTE AEPRSGKAEC NSQPPPEQPK QDYIHVRARR GQATDSHSLA 180 ERARREKISD RMKILQDLVP GCNKVIGKAL VLDEIINYIQ SLQHQVEFLS MKLEAVNSRV 240 SPGIEVFPPK DYGQQTFDTT GVAFGSQATR EYSSRGPSPE WLHMQIGGGF ERTT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G59640.1 | 2e-86 | bHLH family protein |