PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023536848.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 440aa MW: 48891.3 Da PI: 7.3364

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023536848.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	113.6	2.1e-35	33	177	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra......... 77 lp+G++F+Ptd+el+ e+L++kve+k+ ++++ i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+ XP_023536848.1 33 LPAGVKFDPTDQELI-EHLEAKVEAKNdikshplIDEFIPtIEGEdGICYTHPEKLP-GVTRDGLSRHFFHRPSKAYTTGTRKRRKiqtecdfqg 125 799**********.99***9987775553333333766646******.555666799**************7555555544 PP NAM 78 tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l XP_023536848.1 126 GGETRWHKTGKTRPVMA-SGRQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 177 33778********.9999******5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence
MPSLRSIRSA DQSSAQGADT SLKPSRVQDW LGLPAGVKFD PTDQELIEHL EAKVEAKNDI 60 KSHPLIDEFI PTIEGEDGIC YTHPEKLPGV TRDGLSRHFF HRPSKAYTTG TRKRRKIQTE 120 CDFQGGGETR WHKTGKTRPV MASGRQKGCK KILVLYTNFG KNRKPEKTNW VMHQYHLGQH 180 EEEKEGELVV SKIFYQTQPR QCNWSSAEKG SGGGIGEVTG DNVVLSSRRE SGSGSCSSSR 240 EMTTPRDEMS PVGGGGGSGG LCPPPHIAVT YGGLDHIQQF KADHFGFGSF RRNFDEVGIG 300 EASTTRESAP TEDIGDHHRH HHLQRQHHHP TATTAFQITR PSNPISTIIC PPPLHHSSII 360 LDHDSYRVSP LILQNESFQQ QQQHHHKLGG RSASGLEELI MGCTSSNIKE ESTMGSNAQE 420 AAEWMKYSPF WPDPDNPNHH

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence

MPSLRSIRSA DQSSAQGADT SLKPSRVQDW LGLPAGVKFD PTDQELIEHL EAKVEAKNDI  60
KSHPLIDEFI PTIEGEDGIC YTHPEKLPGV TRDGLSRHFF HRPSKAYTTG TRKRRKIQTE  120
CDFQGGGETR WHKTGKTRPV MASGRQKGCK KILVLYTNFG KNRKPEKTNW VMHQYHLGQH  180
EEEKEGELVV SKIFYQTQPR QCNWSSAEKG SGGGIGEVTG DNVVLSSRRE SGSGSCSSSR  240
EMTTPRDEMS PVGGGGGSGG LCPPPHIAVT YGGLDHIQQF KADHFGFGSF RRNFDEVGIG  300
EASTTRESAP TEDIGDHHRH HHLQRQHHHP TATTAFQITR PSNPISTIIC PPPLHHSSII  360
LDHDSYRVSP LILQNESFQQ QQQHHHKLGG RSASGLEELI MGCTSSNIKE ESTMGSNAQE  420
AAEWMKYSPF WPDPDNPNHH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-118	NAC family protein