PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023536847.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 452aa MW: 50159.9 Da PI: 7.2418

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023536847.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	113.5	2.3e-35	45	189	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra......... 77 lp+G++F+Ptd+el+ e+L++kve+k+ ++++ i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+ XP_023536847.1 45 LPAGVKFDPTDQELI-EHLEAKVEAKNdikshplIDEFIPtIEGEdGICYTHPEKLP-GVTRDGLSRHFFHRPSKAYTTGTRKRRKiqtecdfqg 137 799**********.99***9987775553333333766646******.555666799**************7555555544 PP NAM 78 tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l XP_023536847.1 138 GGETRWHKTGKTRPVMA-SGRQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 189 33778********.9999******5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 452 aa Download sequence
MKSSLGSITS SDLIDAKLEE HQKCGSKQCP GCGHKLEAKP DWLGLPAGVK FDPTDQELIE 60 HLEAKVEAKN DIKSHPLIDE FIPTIEGEDG ICYTHPEKLP GVTRDGLSRH FFHRPSKAYT 120 TGTRKRRKIQ TECDFQGGGE TRWHKTGKTR PVMASGRQKG CKKILVLYTN FGKNRKPEKT 180 NWVMHQYHLG QHEEEKEGEL VVSKIFYQTQ PRQCNWSSAE KGSGGGIGEV TGDNVVLSSR 240 RESGSGSCSS SREMTTPRDE MSPVGGGGGS GGLCPPPHIA VTYGGLDHIQ QFKADHFGFG 300 SFRRNFDEVG IGEASTTRES APTEDIGDHH RHHHLQRQHH HPTATTAFQI TRPSNPISTI 360 ICPPPLHHSS IILDHDSYRV SPLILQNESF QQQQQHHHKL GGRSASGLEE LIMGCTSSNI 420 KEESTMGSNA QEAAEWMKYS PFWPDPDNPN HH

Sequence ? help Back to Top

Protein Sequence Length: 452 aa Download sequence

MKSSLGSITS SDLIDAKLEE HQKCGSKQCP GCGHKLEAKP DWLGLPAGVK FDPTDQELIE  60
HLEAKVEAKN DIKSHPLIDE FIPTIEGEDG ICYTHPEKLP GVTRDGLSRH FFHRPSKAYT  120
TGTRKRRKIQ TECDFQGGGE TRWHKTGKTR PVMASGRQKG CKKILVLYTN FGKNRKPEKT  180
NWVMHQYHLG QHEEEKEGEL VVSKIFYQTQ PRQCNWSSAE KGSGGGIGEV TGDNVVLSSR  240
RESGSGSCSS SREMTTPRDE MSPVGGGGGS GGLCPPPHIA VTYGGLDHIQ QFKADHFGFG  300
SFRRNFDEVG IGEASTTRES APTEDIGDHH RHHHLQRQHH HPTATTAFQI TRPSNPISTI  360
ICPPPLHHSS IILDHDSYRV SPLILQNESF QQQQQHHHKL GGRSASGLEE LIMGCTSSNI  420
KEESTMGSNA QEAAEWMKYS PFWPDPDNPN HH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-139	NAC family protein