PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023536846.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | NAC | ||||||||
Protein Properties | Length: 452aa MW: 50159.9 Da PI: 7.2418 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 113.5 | 2.3e-35 | 45 | 189 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra......... 77 lp+G++F+Ptd+el+ e+L++kve+k+ ++++ i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+ XP_023536846.1 45 LPAGVKFDPTDQELI-EHLEAKVEAKNdikshplIDEFIPtIEGEdGICYTHPEKLP-GVTRDGLSRHFFHRPSKAYTTGTRKRRKiqtecdfqg 137 799************.99*******9987775553333333766646**********.555666799******************7555555544 PP NAM 78 tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l XP_023536846.1 138 GGETRWHKTGKTRPVMA-SGRQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 189 33778************.9999**********5547999999*********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 452 aa Download sequence |
MKSSLGSITS SDLIDAKLEE HQKCGSKQCP GCGHKLEAKP DWLGLPAGVK FDPTDQELIE 60 HLEAKVEAKN DIKSHPLIDE FIPTIEGEDG ICYTHPEKLP GVTRDGLSRH FFHRPSKAYT 120 TGTRKRRKIQ TECDFQGGGE TRWHKTGKTR PVMASGRQKG CKKILVLYTN FGKNRKPEKT 180 NWVMHQYHLG QHEEEKEGEL VVSKIFYQTQ PRQCNWSSAE KGSGGGIGEV TGDNVVLSSR 240 RESGSGSCSS SREMTTPRDE MSPVGGGGGS GGLCPPPHIA VTYGGLDHIQ QFKADHFGFG 300 SFRRNFDEVG IGEASTTRES APTEDIGDHH RHHHLQRQHH HPTATTAFQI TRPSNPISTI 360 ICPPPLHHSS IILDHDSYRV SPLILQNESF QQQQQHHHKL GGRSASGLEE LIMGCTSSNI 420 KEESTMGSNA QEAAEWMKYS PFWPDPDNPN HH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G29230.1 | 1e-139 | NAC family protein |