PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023536824.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TALE

Protein Properties

Length: 501aa MW: 55596.2 Da PI: 6.1886

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023536824.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	26.1	1.5e-08	439	477	18	54
HHHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 18 lFek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +F++ ++yp+ +e+ LA k gLt +qV++WF N R + XP_023536824.1 439 MFQNflHPYPKDTEKHLLAVKSGLTRNQVSNWFINARVR 477 6887779******************************88 PP
2	BELL	52.3	1.5e-17	315	378	6	70
BELL 6 qkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiae 70 +k+++Ll+l++ +d+rY q+ ++++tv s+F+a+ l++ +++ + ++i+ +++L+++i++ XP_023536824.1 315 DAKRSHLLTLQQLIDERYTQCLDEIHTVTSAFHAASNLDP-RLHSHYTYQTITSVYKSLREKITN 378 579***********************************.********************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 501 aa Download sequence
MASTNSVIVG DILPLRTPIA AGFPILLTLR ESGCPATDAD DHIVDQLGFL GSSPMSTAPQ 60 PNDLGDVSGG CLNFSGNAEF QDQLAGAIPI ASVSPVNAKD SAFSAPQFQQ LGTFRTRFEH 120 SSSNASNSSF ASSLNCEGDE SLCNANNEWE NGHFLYNQPI ARDNPVRSDF QTISSMENLV 180 QNGWMPSNTM NSKLWNELSL SLATSEPVIV GGTNFLDQYS QLTFPGATQP CLNNTELACN 240 SMDLSLSYNY GSSPVHPSQA ISGSRYLSVI QDILSQIASY PLESSDQVSH SSTTVGFVPF 300 SSSSLETQWP KSSGDAKRSH LLTLQQLIDE RYTQCLDEIH TVTSAFHAAS NLDPRLHSHY 360 TYQTITSVYK SLREKITNCI LAMGMHSNTV CTKEKEKSFE TTFIRKQWAL QQLKRKDNQL 420 WRAQRGLPEN SVSVLRAWMF QNFLHPYPKD TEKHLLAVKS GLTRNQVSNW FINARVRLWK 480 PMIEEMYAEM SRRKSFQNDL G

Sequence ? help Back to Top

Protein Sequence Length: 501 aa Download sequence

MASTNSVIVG DILPLRTPIA AGFPILLTLR ESGCPATDAD DHIVDQLGFL GSSPMSTAPQ  60
PNDLGDVSGG CLNFSGNAEF QDQLAGAIPI ASVSPVNAKD SAFSAPQFQQ LGTFRTRFEH  120
SSSNASNSSF ASSLNCEGDE SLCNANNEWE NGHFLYNQPI ARDNPVRSDF QTISSMENLV  180
QNGWMPSNTM NSKLWNELSL SLATSEPVIV GGTNFLDQYS QLTFPGATQP CLNNTELACN  240
SMDLSLSYNY GSSPVHPSQA ISGSRYLSVI QDILSQIASY PLESSDQVSH SSTTVGFVPF  300
SSSSLETQWP KSSGDAKRSH LLTLQQLIDE RYTQCLDEIH TVTSAFHAAS NLDPRLHSHY  360
TYQTITSVYK SLREKITNCI LAMGMHSNTV CTKEKEKSFE TTFIRKQWAL QQLKRKDNQL  420
WRAQRGLPEN SVSVLRAWMF QNFLHPYPKD TEKHLLAVKS GLTRNQVSNW FINARVRLWK  480
PMIEEMYAEM SRRKSFQNDL G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32980.1	2e-92	TALE family protein