PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023536625.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 236aa    MW: 26516.1 Da    PI: 6.8036
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023536625.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.21.4e-08139179954
                     HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  XP_023536625.1 139 ARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 179
                     699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MENDDLKSED QMEIMMMMQQ MEKIPEFYNH LSPPSDHFSS STTDPHCLET LQQAAESSSP  60
PFTNNLPYNL PQTVPFPTSS RWRNSGGETD LQKQRSVAAM REMIFRIAVM QPIQIDPEAV  120
KPPKRRNVKI STDPQSVAAR HRRERISERI RILQRLVPGG TKMDTASMLD EAIHYVKFLK  180
TQVQSLERAA TNRPLPDAAA AAASGVGFPL EMSSGSYVPM AKPSQMTHNL EQYGDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50330.14e-44bHLH family protein