PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023536461.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 362aa MW: 40057 Da PI: 7.8801

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023536461.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	178.9	1.3e-55	22	150	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL kkv +++++ ++i+evd++k+ePw+Lp+k+k +ekewyfFs rd+ky+tg r+nrat++gyWkatgkd+e++s XP_023536461.1 22 LPPGFRFHPTDEELITYYLLKKVLDSSFSG-RAIAEVDLNKCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSV 115 79***********************999.89***********99999************************************97 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrle 129 + +lvg+kktLvfy+grapkgek++Wvmheyrle XP_023536461.1 116 kTCSLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLE 150 45677**************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MDVSSFSRYD SAAVDHPHPH HLPPGFRFHP TDEELITYYL LKKVLDSSFS GRAIAEVDLN 60 KCEPWELPEK AKMGEKEWYF FSLRDRKYPT GLRTNRATEA GYWKATGKDR EIYSVKTCSL 120 VGMKKTLVFY RGRAPKGEKS NWVMHEYRLE GKFAYHYLST NSKDEWVISR VFQKSGTGVG 180 GGVDGGGGSR KPRFIPGTVS VYPEPSSPSS VSLPPLLDSS LYSAPVAATA VSGNITDRDS 240 CSYNSPREHV SCFSTTAGGS FNIPSYDFAT PPPLLAAVDP SPRFHRNMGL SAFPSLRSLQ 300 ENLQLPFFYS PVNLPSPPPP PLHHGNMSSS ADVVACNSAG NWGVSDEPRS MNSTELDCMW 360 SY

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MDVSSFSRYD SAAVDHPHPH HLPPGFRFHP TDEELITYYL LKKVLDSSFS GRAIAEVDLN  60
KCEPWELPEK AKMGEKEWYF FSLRDRKYPT GLRTNRATEA GYWKATGKDR EIYSVKTCSL  120
VGMKKTLVFY RGRAPKGEKS NWVMHEYRLE GKFAYHYLST NSKDEWVISR VFQKSGTGVG  180
GGVDGGGGSR KPRFIPGTVS VYPEPSSPSS VSLPPLLDSS LYSAPVAATA VSGNITDRDS  240
CSYNSPREHV SCFSTTAGGS FNIPSYDFAT PPPLLAAVDP SPRFHRNMGL SAFPSLRSLQ  300
ENLQLPFFYS PVNLPSPPPP PLHHGNMSSS ADVVACNSAG NWGVSDEPRS MNSTELDCMW  360
SY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53950.1	1e-106	NAC family protein