PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023536427.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 356aa    MW: 38546.1 Da    PI: 6.1797
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023536427.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.53.2e-10212260355
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      +h+ +Er RR++i +++  L+el+P +    +k   Ka +L + ++Y++sLq
  XP_023536427.1 212 NSHSLAERVRREKISERMRLLQELVPGC----NKITGKAVMLDEIINYVQSLQ 260
                     58**************************....999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    
MGDLENDEMG FRNSNEGLLN CSSSDKIPGT MAMGSFFGSG WDPMVSSHGE FSNSFPVVLE  60
SHGGSGTTQG VHYPTDLGFA NGNYSDMFGS FGVAGQILGG CSSNYRNGGT TEKLLPPSGE  120
ETAAGSPNGK LRKRALDSTF PFSQPNKKSE VKLKKDVSGD SSSTQEEKNA EMEQKLGGKA  180
TGKQAKEKTN DSTEAPKENY IHVRARRGQA TNSHSLAERV RREKISERMR LLQELVPGCN  240
KITGKAVMLD EIINYVQSLQ QQVEFLSMKL ATVNPDVNVD IERILSNDIF HARGSNGTVL  300
GYDPGLSAVS PVPPHRIFQL QGTMSNMPTN TTFTQFPPLP QVANMTVLES DIQSLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.12e-72bHLH family protein