PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023536303.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | Trihelix | ||||||||
Protein Properties | Length: 474aa MW: 54153.9 Da PI: 8.6833 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 88.9 | 5.5e-28 | 51 | 136 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW++qe+laL+++r++m+ ++r++ k+plW+evs+k+re gf+r+pk+Ckek+en+ k++k++ke +++++++s++ +++ d+le XP_023536303.1 51 RWPRQETLALLKIRSDMGVAFRDATHKAPLWDEVSRKLRELGFNRTPKKCKEKFENVYKYHKRTKEARGGKSNNSKKIYRFSDELE 136 8*********************************************************************9999999999999997 PP | |||||||
2 | trihelix | 98.6 | 5.2e-31 | 326 | 411 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k+e+ aLi++r++me +++++ +k+ Wee+s +mr g++rs+k+Ckekwen+nk++kk+k+++kkr +e+ +tcpy++ql+a XP_023536303.1 326 RWPKEEIEALIRVRTRMEMKYEENGAKGLVWEEISTAMRGFGYNRSSKRCKEKWENINKYFKKVKDSNKKR-PEDAKTCPYYHQLDA 411 8*********************************************************************8.99999********85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 474 aa Download sequence |
MEVDSGEAVV AAAADEAVET HEEVSGGGGG GGGGGSNSGE EEKGLSFGGN RWPRQETLAL 60 LKIRSDMGVA FRDATHKAPL WDEVSRKLRE LGFNRTPKKC KEKFENVYKY HKRTKEARGG 120 KSNNSKKIYR FSDELEAFNH ISFQSHHRQV AATPSHYDQP GKITTDTIIS TMNNSLPPKP 180 SNPLSNFPNM ALNVMFSSST SSSTASEEDP FRSRRRRRKK RKWSDFFLRL TKEVIEKQEG 240 LQLKFLEALE RIENQRKLRD EAWRIKEMKR VNQEHEVLVQ EMSIAAAKDA AVVALLQKIS 300 PFPSPPPPPP PPPSTRPQDG EIRPSRWPKE EIEALIRVRT RMEMKYEENG AKGLVWEEIS 360 TAMRGFGYNR SSKRCKEKWE NINKYFKKVK DSNKKRPEDA KTCPYYHQLD AIYKEKEKGM 420 SFDINSQMEP LMVEPEQQWP PPFQVNQIMG NQEEEEEEEE ESSSTEGLQS SISI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 214 | 220 | RRRRRKK |
2 | 214 | 222 | RRRRRKKRK |
3 | 215 | 221 | RRRRRKK |
4 | 216 | 221 | RRRKKR |
5 | 216 | 222 | RRRKKRK |
6 | 216 | 222 | RRRRRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G76890.2 | 9e-62 | Trihelix family protein |