PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023536105.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family SBP
Protein Properties Length: 202aa    MW: 22671.1 Da    PI: 9.1199
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023536105.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP133.66.3e-4278154278
                     -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
             SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                     Cq+++C++dlseak+yhrrhkvCe+hska+vv+v+g++qrfCqqCsrfhel+efDe+krsCrrrLa+hnerrrk++a
  XP_023536105.1  78 CQAHNCTTDLSEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQQCSRFHELTEFDEAKRSCRRRLAGHNERRRKSSA 154
                     **************************************************************************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
MEAKSYEGKH NLKDKAYKEG VIDDDLEYET EEEDVGGGGH GGTNACTALG YYENEKKKRG  60
TAVSGRGRSG SGVSSPSCQA HNCTTDLSEA KRYHRRHKVC EFHSKAAVVM VAGIRQRFCQ  120
QCSRFHELTE FDEAKRSCRR RLAGHNERRR KSSAECQGES TNRKGSVSQS KEGHCRQLME  180
DQRSRIQMAP TGSSGYKHLH IR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53160.13e-44SBP family protein